Disease dossier · ORPHAN-010

Alpha-1 Antitrypsin Deficiency

SERPINA1 · Metabolic / Serpinopathy

TJ Compassion + L.O.V.E. verified registry ORPHA 60 OMIM 613490

01At a glance

Gene
SERPINA1
Protein
Alpha-1-antitrypsin (Serpin A1)UniProt P01009 · 418 aa
Inheritance
Autosomal co-dominant — SERPINA1 Z allele (Glu342Lys, the PI*Z variant) homozygosity is the most common severe form
Age of onset
Lung: early adulthood (emphysema, worse with smoking); Liver: infancy (cholestatic jaundice) to adulthood (cirrhosis)
Prevalence
~1 in 2,500-5,000 (PI*ZZ, European descent) — commonly cited; UNVERIFIED exact figure this sessionMarked unverified in the registry
Category
Metabolic / Serpinopathy
Mechanism class
dual_gof_lof
Clinical trials
147 studiesClinicalTrials.gov, 2 Nov 2026

02What it is

Alpha-1 antitrypsin deficiency is an autosomal co-dominant disorder caused by the SERPINA1 Z allele, whose protein product polymerizes and accumulates in the liver (causing cirrhosis) while deficient circulating antiprotease leaves the lungs vulnerable to emphysema. It is a dual gain-of-function (liver) and loss-of-function (lung) disease; augmentation therapy treats the lung component.

03What goes wrong

Dual mechanism. (1) Gain-of-function in the liver: the Z-variant alpha-1-antitrypsin misfolds and polymerizes, accumulating in hepatocyte endoplasmic reticulum, causing liver injury, fibrosis, and cirrhosis. (2) Loss-of-function in the lung: reduced circulating A1AT (a serine protease inhibitor) leaves the lung unprotected from neutrophil elastase, causing early-onset emphysema. The liver toxicity is the toxic-gain-of-function component.

04How NIGHTINGALE routes it

mechanism: dual_gof_lof not a degradation target

Recommended modality: augmentation (LoF) + polymer blocker/degrader (GoF, investigational)

COMPLEX — NOT a blanket 'eligible'. The liver disease is a toxic gain-of-function (Z-AAT polymerization), so a selective degrader of polymerized Z-AAT is mechanistically plausible for the HEPATIC component. However the lung disease is loss-of-function (deficient antiprotease), where degradation would worsen it. AUTOTAC is NOT appropriate for the disease as a whole — only a targeted hepatic strategy would qualify. The approved therapy is augmentation (restore the missing antiprotease), which addresses the LoF component.

05Treatment today

Alpha-1 Proteinase Inhibitor (human, e.g. Prolastin-C / Zemaira / Aralast)

1987 (first A1AT augmentation products)
Augmentation therapy (purified human A1AT) · biologic — MW not applicable

Intravenous infusion of purified human alpha-1-antitrypsin to restore circulating antiprotease levels, protecting the lung from elastase-mediated damage. Addresses the loss-of-function component only; does not clear hepatic Z-AAT polymers.

06In the pipeline

Key reference: PMID 32268028 · PubMed

07Verification

Every line below is the registry's own verification record — what was checked, against which source, and what is still open.

Amber entries are the registry's own open items — figures it could not re-confirm in the 2026-10-04 pass. They are shown rather than hidden.

08Sources

FactSourceAccessionRetrieved
Gene/protein identityUniProtP01009 (SERPINA1, Alpha-1-antitrypsin, 418 aa)2026-10-04
Disease classification & definitionOrphanetORPHAcode 60 (Alpha-1-antitrypsin deficiency)2026-10-04
Inheritance & geneticsOMIM613490 (Alpha-1-antitrypsin deficiency)2026-10-04
Z-AAT polymerisation (gain-of-function) mechanismJCI Insight 2025Ronzoni et al., polymer-blocking therapy (10.1172/jci.insight.194354)2026-10-04
Source record: ORPHAN-010.json — orphan registry v2.0-fresh-2026-10-04. Protocol: TJ Compassion + L.O.V.E. — every fact live-verified against UniProt / PubChem / ClinVar / OMIM / FDA / Orphanet
Fresh orphan registry entry built 2026-10-04 under the orphan-disease-verification skill.
Corrections carried into registry v2 (3)
  • VERIFIED (2026-10-04): built fresh. ORPHAcode 60 confirmed live via Orphanet API.
  • CLARIFIED: A1AT deficiency is a DUAL-mechanism disease — liver (toxic GoF polymerisation) + lung (LoF antiprotease deficiency). AUTOTAC is NOT a blanket 'eligible' — only the hepatic component is a plausible degrader target.
  • CLARIFIED: augmentation therapy addresses the LoF (lung) component only; it does not clear hepatic Z-AAT polymers.

09Scope and limits

This page is a research summary for teaching and scientific communication. It is not medical advice, a diagnosis, or a treatment recommendation. NEXUS NIGHTINGALE is a computational research pipeline; it is not clinically validated and none of its output has regulatory approval. Prevalence and approval figures marked unverified must be confirmed against the cited source before external use.
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